Index

C

calculate_odds_ratio() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2)

G

generate_feature_matrix() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) generate_icdfeature_matrix() (in module pyPheWAS.pyPhewasv2) get_bhy_thresh() (in module pyPheWAS.pyPhewasv2) get_bon_thresh() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) get_codes() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) get_fdr_thresh() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2)

get_group_file() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) get_icd_info() (in module pyPheWAS.pyPhewasv2) get_imbalances() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) get_input() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) get_phewas_info() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2) get_x_label_positions() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2)

P

phewas() (in module pyPheWAS.pyPhewasv2) plot_data_points() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2)

plot_odds_ratio() (in module pyPheWAS.pyPhewasv2) pyPheWAS (module) pyPheWAS.pyPhewasCore (module) pyPheWAS.pyPhewasv2 (module)

R

run_icd_phewas() (in module pyPheWAS.pyPhewasv2)

run_phewas() (in module pyPheWAS.pyPhewasCore) (in module pyPheWAS.pyPhewasv2)